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jhrcook
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Computational genomics researcher at Vertex Pharmaceuticals.
For more information about myself, interests, and hobbies, checkout my website, CV, or resume (updates and tailored resumes coming soon). Feel free to get in touch!
Currently, I'm working on the 2023 Advent of Code in my attempt to learn the Rust programming language.
To learn new skills and play with fun tools, I have worked on a variety of personal side-projects including
- building a web API, web interface, and SwiftBar plugin for tracking my coffee consumption,
- a comparison of ML methods for summarizing scientific articles,
- experimenting with and packaging the 'tumoroscope' model in PyMC (a probabilistic programming language in Python for building Bayesian models and performing MCMC),
- and a R package 'mustashe' for intelligently caching computed results.
I've also made small contributions to other projects such as snakemake and the Fig autocomplete repository.
- Favorite apps on my Mac
- Quickstart for playing with LLMs locally
- Favorite books of 2023
- Build and push a Rust project to Deta on GitHub Actions
- Leveraging generic type hints of classes in Python
All of my blog posts can be found here.
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