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Copy pathtest_binary_hashindex.py
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228 lines (179 loc) · 6.56 KB
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# Copyright (c) Meta Platforms, Inc. and affiliates.
#
# This source code is licensed under the MIT license found in the
# LICENSE file in the root directory of this source tree.
import unittest
import numpy as np
import faiss
from common_faiss_tests import for_all_simd_levels, make_binary_dataset
def bitvec_shuffle(a, order):
n, d = a.shape
db, = order.shape
b = np.empty((n, db // 8), dtype='uint8')
faiss.bitvec_shuffle(
n, d * 8, db,
faiss.swig_ptr(order),
faiss.swig_ptr(a), faiss.swig_ptr(b))
return b
class TestSmallFuncs(unittest.TestCase):
def test_shuffle(self):
d = 256
n = 1000
rs = np.random.RandomState(123)
o = rs.permutation(d).astype('int32')
x = rs.randint(256, size=(n, d // 8)).astype('uint8')
y1 = bitvec_shuffle(x, o[:128])
y2 = bitvec_shuffle(x, o[128:])
y = np.hstack((y1, y2))
oinv = np.empty(d, dtype='int32')
oinv[o] = np.arange(d)
z = bitvec_shuffle(y, oinv)
np.testing.assert_array_equal(x, z)
@for_all_simd_levels
class TestRange(unittest.TestCase):
def test_hash(self):
d = 128
nq = 100
nb = 2000
(_, xb, xq) = make_binary_dataset(d, 0, nb, nq)
index_ref = faiss.IndexBinaryFlat(d)
index_ref.add(xb)
radius = 55
Lref, Dref, Iref = index_ref.range_search(xq, radius)
index = faiss.IndexBinaryHash(d, 10)
index.add(xb)
# index.display()
nfound = []
ndis = []
stats = faiss.cvar.indexBinaryHash_stats
for n_bitflips in range(index.b + 1):
index.nflip = n_bitflips
stats.reset()
Lnew, Dnew, Inew = index.range_search(xq, radius)
for i in range(nq):
ref = Iref[Lref[i]:Lref[i + 1]]
new = Inew[Lnew[i]:Lnew[i + 1]]
snew = set(new)
# no duplicates
self.assertTrue(len(new) == len(snew))
# subset of real results
self.assertTrue(snew <= set(ref))
nfound.append(Lnew[-1])
ndis.append(stats.ndis)
nfound = np.array(nfound)
self.assertTrue(nfound[-1] == Lref[-1])
self.assertTrue(np.all(nfound[1:] >= nfound[:-1]))
def test_multihash(self):
d = 128
nq = 100
nb = 2000
(_, xb, xq) = make_binary_dataset(d, 0, nb, nq)
index_ref = faiss.IndexBinaryFlat(d)
index_ref.add(xb)
radius = 55
Lref, Dref, Iref = index_ref.range_search(xq, radius)
nfound = []
ndis = []
for nh in 1, 3, 5:
index = faiss.IndexBinaryMultiHash(d, nh, 10)
index.add(xb)
# index.display()
stats = faiss.cvar.indexBinaryHash_stats
index.nflip = 2
stats.reset()
Lnew, Dnew, Inew = index.range_search(xq, radius)
for i in range(nq):
ref = Iref[Lref[i]:Lref[i + 1]]
new = Inew[Lnew[i]:Lnew[i + 1]]
snew = set(new)
# no duplicates
self.assertTrue(len(new) == len(snew))
# subset of real results
self.assertTrue(snew <= set(ref))
nfound.append(Lnew[-1])
ndis.append(stats.ndis)
nfound = np.array(nfound)
# self.assertTrue(nfound[-1] == Lref[-1])
self.assertTrue(np.all(nfound[1:] >= nfound[:-1]))
@for_all_simd_levels
class TestKnn(unittest.TestCase):
def test_hash_and_multihash(self):
d = 128
nq = 100
nb = 2000
(_, xb, xq) = make_binary_dataset(d, 0, nb, nq)
index_ref = faiss.IndexBinaryFlat(d)
index_ref.add(xb)
k = 10
Dref, Iref = index_ref.search(xq, k)
nfound = {}
for nh in 0, 1, 3, 5:
for nbit in 4, 7:
if nh == 0:
index = faiss.IndexBinaryHash(d, nbit)
else:
index = faiss.IndexBinaryMultiHash(d, nh, nbit)
index.add(xb)
index.nflip = 2
Dnew, Inew = index.search(xq, k)
nf = 0
for i in range(nq):
ref = Iref[i]
new = Inew[i]
snew = set(new)
# no duplicates
self.assertTrue(len(new) == len(snew))
nf += len(set(ref) & snew)
nfound[(nh, nbit)] = nf
self.assertGreater(nfound[(nh, 4)], nfound[(nh, 7)])
# test serialization
index2 = faiss.deserialize_index_binary(
faiss.serialize_index_binary(index))
D2, I2 = index2.search(xq, k)
np.testing.assert_array_equal(Inew, I2)
np.testing.assert_array_equal(Dnew, D2)
# Verify deserialized index is serializable again
index3 = faiss.deserialize_index_binary(
faiss.serialize_index_binary(index2))
D3, I3 = index3.search(xq, k)
np.testing.assert_array_equal(Inew, I3)
np.testing.assert_array_equal(Dnew, D3)
self.assertGreater(3, abs(nfound[(0, 7)] - nfound[(1, 7)]))
self.assertGreater(nfound[(3, 7)], nfound[(1, 7)])
self.assertGreater(nfound[(5, 7)], nfound[(3, 7)])
def subtest_result_order(self, nh):
d = 128
nq = 10
nb = 200
(_, xb, xq) = make_binary_dataset(d, 0, nb, nq)
nbit = 10
if nh == 0:
index = faiss.IndexBinaryHash(d, nbit)
else:
index = faiss.IndexBinaryMultiHash(d, nh, nbit)
index.add(xb)
index.nflip = 5
k = 10
Do, Io = index.search(xq, k)
self.assertTrue(
np.all(Do[:, 1:] >= Do[:, :-1])
)
def test_result_order_binhash(self):
self.subtest_result_order(0)
def test_result_order_multihash(self):
self.subtest_result_order(3)
"""
I suspect this test crashes CircleCI on Linux
# this is an expensive test, so we don't run it by default
class TestLargeIndexWrite: # (unittest.TestCase):
def test_write_580M(self):
dim = 8
nhash = 1
num_million = 580 # changing to 570 works
index1 = faiss.IndexBinaryMultiHash(dim, nhash, int(dim/nhash))
random_hash_codes = np.random.randint(0, 256, (
num_million * int(1e6), int(dim/8))).astype("uint8")
index1.add(random_hash_codes)
faiss.write_index_binary(index1, "/tmp/tmp.faiss")
index2 = faiss.read_index_binary("/tmp/tmp.faiss")
"""
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